mzRTree: An Optimized Data Structure for High Throughput 3D Proteomics Data

Efficient range queries of MS-based proteomics data

mzRTreeThe Java code of mzRTree is available here: mzRTree.tar.gz (2010-07-13, version 1.1).

More details on the data structure are available in the full paper: S. Nasso, F. Silvestri, F. Tisiot, B. Di Camillo, A. Pietracaprina, G. M. Toffolo. An Optimized Data Structure for High Throughput 3D Proteomics Data: mzRTree. Journal of Proteomics, Volume 73, Issue 6, 18 April 2010, Pages 1176-1182, special issue on Clinical Proteomics (3rd EuPA Meeting). DOI:10.1016/j.jprot.2010.02.006. (A pre-print is also available on arXiv).

For information, please write us at mzrtree AT dei.unipd.it.